Submodules#
graph-tool is subdivided into the following submodules:
graph_tool- graph_tool.Graph
- graph_tool.GraphView
- graph_tool.Vertex
- graph_tool.Edge
- graph_tool.PropertyMap
- graph_tool.VertexPropertyMap
- graph_tool.EdgePropertyMap
- graph_tool.GraphPropertyMap
- graph_tool.PropertyArray
- graph_tool.group_vector_property
- graph_tool.ungroup_vector_property
- graph_tool.map_property_values
- graph_tool.infect_vertex_property
- graph_tool.edge_endpoint_property
- graph_tool.incident_edges_op
- graph_tool.perfect_prop_hash
- graph_tool.value_types
- graph_tool.load_graph
- graph_tool.load_graph_from_csv
- graph_tool.openmp_enabled
- graph_tool.openmp_get_num_threads
- graph_tool.openmp_set_num_threads
- graph_tool.openmp_get_schedule
- graph_tool.openmp_set_schedule
- graph_tool.show_config
graph_tool.centrality- graph_tool.centrality.pagerank
- graph_tool.centrality.betweenness
- graph_tool.centrality.central_point_dominance
- graph_tool.centrality.closeness
- graph_tool.centrality.eigenvector
- graph_tool.centrality.katz
- graph_tool.centrality.hits
- graph_tool.centrality.eigentrust
- graph_tool.centrality.trust_transitivity
graph_tool.clusteringgraph_tool.collection- graph_tool.collection.LCF_graph
- graph_tool.collection.bull_graph
- graph_tool.collection.chvatal_graph
- graph_tool.collection.cubical_graph
- graph_tool.collection.desargues_graph
- graph_tool.collection.diamond_graph
- graph_tool.collection.dodecahedral_graph
- graph_tool.collection.frucht_graph
- graph_tool.collection.heawood_graph
- graph_tool.collection.hoffman_singleton_graph
- graph_tool.collection.house_graph
- graph_tool.collection.icosahedral_graph
- graph_tool.collection.krackhardt_kite_graph
- graph_tool.collection.moebius_kantor_graph
- graph_tool.collection.octahedral_graph
- graph_tool.collection.pappus_graph
- graph_tool.collection.petersen_graph
- graph_tool.collection.sedgewick_maze_graph
- graph_tool.collection.tetrahedral_graph
- graph_tool.collection.truncated_cube_graph
- graph_tool.collection.truncated_tetrahedron_graph
- graph_tool.collection.tutte_graph
graph_tool.correlationsgraph_tool.dynamics- graph_tool.dynamics.DiscreteStateBase
- graph_tool.dynamics.EpidemicStateBase
- graph_tool.dynamics.SIState
- graph_tool.dynamics.SISState
- graph_tool.dynamics.SIRState
- graph_tool.dynamics.SIRSState
- graph_tool.dynamics.VoterState
- graph_tool.dynamics.MajorityVoterState
- graph_tool.dynamics.BinaryThresholdState
- graph_tool.dynamics.IsingGlauberState
- graph_tool.dynamics.CIsingGlauberState
- graph_tool.dynamics.IsingMetropolisState
- graph_tool.dynamics.PottsGlauberState
- graph_tool.dynamics.PottsMetropolisState
- graph_tool.dynamics.AxelrodState
- graph_tool.dynamics.BooleanState
- graph_tool.dynamics.KirmanState
- graph_tool.dynamics.ContinuousStateBase
- graph_tool.dynamics.KuramotoState
graph_tool.draw- graph_tool.draw.sfdp_layout
- graph_tool.draw.fruchterman_reingold_layout
- graph_tool.draw.arf_layout
- graph_tool.draw.radial_tree_layout
- graph_tool.draw.planar_layout
- graph_tool.draw.random_layout
- graph_tool.draw.graph_draw
- graph_tool.draw.draw_hierarchy
- graph_tool.draw.graphviz_draw
- graph_tool.draw.prop_to_size
- graph_tool.draw.get_hierarchy_control_points
- graph_tool.draw.cairo_draw
- graph_tool.draw.interactive_window
- graph_tool.draw.GraphWidget
- graph_tool.draw.GraphWindow
graph_tool.flowgraph_tool.generation- graph_tool.generation.random_graph
- graph_tool.generation.random_rewire
- graph_tool.generation.add_random_edges
- graph_tool.generation.remove_random_edges
- graph_tool.generation.generate_triadic_closure
- graph_tool.generation.price_network
- graph_tool.generation.generate_sbm
- graph_tool.generation.generate_maxent_sbm
- graph_tool.generation.solve_sbm_fugacities
- graph_tool.generation.generate_knn
- graph_tool.generation.geometric_graph
- graph_tool.generation.triangulation
- graph_tool.generation.predecessor_tree
- graph_tool.generation.line_graph
- graph_tool.generation.condensation_graph
- graph_tool.generation.contract_parallel_edges
- graph_tool.generation.remove_parallel_edges
- graph_tool.generation.expand_parallel_edges
- graph_tool.generation.label_parallel_edges
- graph_tool.generation.remove_self_loops
- graph_tool.generation.label_self_loops
- graph_tool.generation.graph_union
- graph_tool.generation.lattice
- graph_tool.generation.complete_graph
- graph_tool.generation.circular_graph
graph_tool.inference- graph_tool.inference.minimize_blockmodel_dl
- graph_tool.inference.minimize_nested_blockmodel_dl
- graph_tool.inference.BlockState
- graph_tool.inference.OverlapBlockState
- graph_tool.inference.LayeredBlockState
- graph_tool.inference.NestedBlockState
- graph_tool.inference.PPBlockState
- graph_tool.inference.RankedBlockState
- graph_tool.inference.ModularityState
- graph_tool.inference.NormCutState
- graph_tool.inference.TemperingState
- graph_tool.inference.CliqueState
- graph_tool.inference.MCMCState
- graph_tool.inference.MultiflipMCMCState
- graph_tool.inference.MultilevelMCMCState
- graph_tool.inference.GibbsMCMCState
- graph_tool.inference.MulticanonicalMCMCState
- graph_tool.inference.ExhaustiveSweepState
- graph_tool.inference.DrawBlockState
- graph_tool.inference.mcmc_equilibrate
- graph_tool.inference.mcmc_anneal
- graph_tool.inference.multicanonical_equilibrate
- graph_tool.inference.MulticanonicalState
- graph_tool.inference.PartitionModeState
- graph_tool.inference.ModeClusterState
- graph_tool.inference.PartitionCentroidState
- graph_tool.inference.partition_overlap
- graph_tool.inference.nested_partition_overlap
- graph_tool.inference.variation_information
- graph_tool.inference.mutual_information
- graph_tool.inference.reduced_mutual_information
- graph_tool.inference.contingency_graph
- graph_tool.inference.shuffle_partition_labels
- graph_tool.inference.order_partition_labels
- graph_tool.inference.order_nested_partition_labels
- graph_tool.inference.align_partition_labels
- graph_tool.inference.align_nested_partition_labels
- graph_tool.inference.partition_overlap_center
- graph_tool.inference.nested_partition_overlap_center
- graph_tool.inference.nested_partition_clear_null
- graph_tool.inference.contiguous_map
- graph_tool.inference.nested_contiguous_map
- graph_tool.inference.mf_entropy
- graph_tool.inference.bethe_entropy
- graph_tool.inference.microstate_entropy
- graph_tool.inference.marginal_multigraph_entropy
- graph_tool.inference.half_edge_graph
- graph_tool.inference.get_block_edge_gradient
- graph_tool.inference.PartitionHist
- graph_tool.inference.BlockPairHist
- graph_tool.inference.LatentLayerBaseState
- graph_tool.inference.LatentMultigraphBlockState
- graph_tool.inference.LatentClosureBlockState
- graph_tool.inference.MeasuredBlockState
- graph_tool.inference.MeasuredClosureBlockState
- graph_tool.inference.MixedMeasuredBlockState
- graph_tool.inference.UncertainBlockState
- graph_tool.inference.UncertainBaseState
- graph_tool.inference.DynamicsBlockStateBase
- graph_tool.inference.EpidemicsBlockState
- graph_tool.inference.IsingBaseBlockState
- graph_tool.inference.IsingGlauberBlockState
- graph_tool.inference.CIsingGlauberBlockState
- graph_tool.inference.PseudoIsingBlockState
- graph_tool.inference.PseudoCIsingBlockState
- graph_tool.inference.latent_multigraph
- graph_tool.inference.EMBlockState
- graph_tool.inference.em_infer
- graph_tool.inference.modularity
graph_tool.search- graph_tool.search.bfs_search
- graph_tool.search.bfs_iterator
- graph_tool.search.dfs_search
- graph_tool.search.dfs_iterator
- graph_tool.search.dijkstra_search
- graph_tool.search.dijkstra_iterator
- graph_tool.search.astar_search
- graph_tool.search.astar_iterator
- graph_tool.search.bellman_ford_search
- graph_tool.search.BFSVisitor
- graph_tool.search.DFSVisitor
- graph_tool.search.DijkstraVisitor
- graph_tool.search.BellmanFordVisitor
- graph_tool.search.AStarVisitor
- graph_tool.search.StopSearch
graph_tool.spectral- graph_tool.spectral.adjacency
- graph_tool.spectral.laplacian
- graph_tool.spectral.incidence
- graph_tool.spectral.transition
- graph_tool.spectral.modularity_matrix
- graph_tool.spectral.hashimoto
- graph_tool.spectral.AdjacencyOperator
- graph_tool.spectral.LaplacianOperator
- graph_tool.spectral.IncidenceOperator
- graph_tool.spectral.TransitionOperator
- graph_tool.spectral.HashimotoOperator
- graph_tool.spectral.CompactHashimotoOperator
graph_tool.statsgraph_tool.topology- graph_tool.topology.shortest_distance
- graph_tool.topology.shortest_path
- graph_tool.topology.random_shortest_path
- graph_tool.topology.count_shortest_paths
- graph_tool.topology.all_shortest_paths
- graph_tool.topology.all_predecessors
- graph_tool.topology.all_paths
- graph_tool.topology.all_circuits
- graph_tool.topology.pseudo_diameter
- graph_tool.topology.similarity
- graph_tool.topology.vertex_similarity
- graph_tool.topology.isomorphism
- graph_tool.topology.subgraph_isomorphism
- graph_tool.topology.mark_subgraph
- graph_tool.topology.max_cliques
- graph_tool.topology.max_cardinality_matching
- graph_tool.topology.max_independent_vertex_set
- graph_tool.topology.min_spanning_tree
- graph_tool.topology.random_spanning_tree
- graph_tool.topology.dominator_tree
- graph_tool.topology.topological_sort
- graph_tool.topology.transitive_closure
- graph_tool.topology.label_components
- graph_tool.topology.label_biconnected_components
- graph_tool.topology.label_largest_component
- graph_tool.topology.extract_largest_component
- graph_tool.topology.label_out_component
- graph_tool.topology.vertex_percolation
- graph_tool.topology.edge_percolation
- graph_tool.topology.kcore_decomposition
- graph_tool.topology.is_bipartite
- graph_tool.topology.is_DAG
- graph_tool.topology.is_planar
- graph_tool.topology.make_maximal_planar
- graph_tool.topology.edge_reciprocity
- graph_tool.topology.tsp_tour
- graph_tool.topology.sequential_vertex_coloring
graph_tool.util